Here is a list of all files with brief descriptions:

[detail level 12345]

► docs
► XMLRPC
xmlrpc.php
► include
► modules
► pseudoclients
chanserv.h
global.h
memoserv.h
nickserv.h
bs_badwords.h
bs_kick.h
cs_entrymsg.h
cs_log.h
cs_mode.h
dns.h
encryption.h
httpd.h
ldap.h
ns_cert.h
os_forbid.h
os_ignore.h
os_news.h
os_session.h
redis.h
sasl.h
set_misc.h
sql.h
ssl.h
suspend.h
xmlrpc.h
access.h
account.h
anope.h
base.h
bots.h
channels.h
commands.h
config.h
defs.h
extensible.h
hashcomp.h
language.h
lists.h
logger.h
mail.h
memo.h
messages.h
modes.h
module.h
modules.h
opertype.h
protocol.h
pstdint.h
regchannel.h
regexpr.h
serialize.h
servers.h
service.h
services.h
socketengine.h
sockets.h
threadengine.h
timers.h
uplink.h
users.h
version.cpp
xline.h
► modules
► commands
bs_assign.cpp
bs_badwords.cpp
bs_bot.cpp
bs_botlist.cpp
bs_control.cpp
bs_info.cpp
bs_kick.cpp
bs_set.cpp
cs_access.cpp
cs_akick.cpp
cs_ban.cpp
cs_clone.cpp
cs_drop.cpp
cs_enforce.cpp
cs_entrymsg.cpp
cs_flags.cpp
cs_getkey.cpp
cs_info.cpp
cs_invite.cpp
cs_kick.cpp
cs_list.cpp
cs_log.cpp
cs_mode.cpp
cs_register.cpp
cs_seen.cpp
cs_set.cpp
cs_set_misc.cpp
cs_status.cpp
cs_suspend.cpp
cs_sync.cpp
cs_topic.cpp
cs_unban.cpp
cs_updown.cpp
cs_xop.cpp
gl_global.cpp
greet.cpp
help.cpp
hs_del.cpp
hs_group.cpp
hs_list.cpp
hs_off.cpp
hs_on.cpp
hs_request.cpp
hs_set.cpp
ms_cancel.cpp
ms_check.cpp
ms_del.cpp
ms_ignore.cpp
ms_info.cpp
ms_list.cpp
ms_read.cpp
ms_rsend.cpp
ms_send.cpp
ms_sendall.cpp
ms_set.cpp
ms_staff.cpp
ns_access.cpp
ns_ajoin.cpp
ns_alist.cpp
ns_cert.cpp
ns_drop.cpp
ns_getemail.cpp
ns_getpass.cpp
ns_group.cpp
ns_identify.cpp
ns_info.cpp
ns_list.cpp
ns_logout.cpp
ns_recover.cpp
ns_register.cpp
ns_resetpass.cpp
ns_set.cpp
ns_set_misc.cpp
ns_status.cpp
ns_suspend.cpp
ns_update.cpp
os_akill.cpp
os_chankill.cpp
os_config.cpp
os_defcon.cpp
os_dns.cpp
os_forbid.cpp
os_ignore.cpp
os_info.cpp
os_jupe.cpp
os_kick.cpp
os_kill.cpp
os_list.cpp
os_login.cpp
os_logsearch.cpp
os_mode.cpp
os_modinfo.cpp
os_module.cpp
os_news.cpp
os_noop.cpp
os_oline.cpp
os_oper.cpp
os_reload.cpp
os_session.cpp
os_set.cpp
os_shutdown.cpp
os_stats.cpp
os_svs.cpp
os_sxline.cpp
os_update.cpp
► database
db_flatfile.cpp
db_old.cpp
db_redis.cpp
db_sql.cpp
db_sql_live.cpp
► encryption
enc_bcrypt.cpp
enc_md5.cpp
enc_none.cpp
enc_old.cpp
enc_sha1.cpp
enc_sha256.cpp
► extra
► stats
► irc2sql
irc2sql.cpp
irc2sql.h
tables.cpp
utils.cpp
cs_fantasy_stats.cpp
cs_fantasy_top.cpp
m_chanstats.cpp
m_ldap.cpp
m_ldap_authentication.cpp
m_ldap_oper.cpp
m_mysql.cpp
m_regex_pcre.cpp
m_regex_posix.cpp
m_regex_tre.cpp
m_sasl_dh-aes.cpp
m_sasl_dh-blowfish.cpp
m_sql_authentication.cpp
m_sql_log.cpp
m_sql_oper.cpp
m_sqlite.cpp
m_ssl_gnutls.cpp
m_ssl_openssl.cpp
► protocol
bahamut.cpp
charybdis.cpp
hybrid.cpp
inspircd12.cpp
inspircd20.cpp
ngircd.cpp
plexus.cpp
ratbox.cpp
unreal.cpp
► pseudoclients
botserv.cpp
chanserv.cpp
global.cpp
hostserv.cpp
memoserv.cpp
nickserv.cpp
operserv.cpp
► webcpanel
► pages
► chanserv
access.cpp
access.h
akick.cpp
akick.h
drop.cpp
drop.h
info.cpp
info.h
modes.cpp
modes.h
set.cpp
set.h
utils.cpp
utils.h
► hostserv
request.cpp
request.h
► memoserv
memos.cpp
memos.h
► nickserv
access.cpp
access.h
alist.cpp
alist.h
cert.cpp
cert.h
info.cpp
info.h
► operserv
akill.cpp
akill.h
confirm.cpp
confirm.h
index.cpp
index.h
logout.cpp
logout.h
register.cpp
register.h
static_fileserver.cpp
static_fileserver.h
template_fileserver.cpp
template_fileserver.h
webcpanel.cpp
webcpanel.h
bs_autoassign.cpp
cs_statusupdate.cpp
fantasy.cpp
m_dns.cpp
m_dnsbl.cpp
m_helpchan.cpp
m_httpd.cpp
m_proxyscan.cpp
m_redis.cpp
m_rewrite.cpp
m_sasl.cpp
m_xmlrpc.cpp
m_xmlrpc_main.cpp
ns_maxemail.cpp
► src
► socketengines
socketengine_epoll.cpp
socketengine_kqueue.cpp
socketengine_poll.cpp
socketengine_select.cpp
► tools
anopesmtp.cpp
► win32
► dir
dir.cpp
dir.h
► dl
dl.cpp
dl.h
► pipe
pipe.cpp
pipe.h
► pthread
pthread.cpp
pthread.h
► sigaction
sigaction.cpp
sigaction.h
anope_windows.h
Config.cs
resource.h
socket.cpp
socket.h
win32_memory.cpp
windows.cpp
access.cpp
account.cpp
base.cpp
base64.cpp
bots.cpp
channels.cpp
command.cpp
config.cpp
extensible.cpp
hashcomp.cpp
init.cpp
language.cpp
logger.cpp
mail.cpp
main.cpp
memos.cpp
messages.cpp
misc.cpp
modes.cpp
module.cpp
modulemanager.cpp
nickalias.cpp
nickcore.cpp
opertype.cpp
pipeengine.cpp
process.cpp
protocol.cpp
regchannel.cpp
serialize.cpp
servers.cpp
socket_clients.cpp
socket_transport.cpp
sockets.cpp
threadengine.cpp
timers.cpp
uplink.cpp
users.cpp
xline.cpp